Best note-taking apps for linked notes and PKM

Backlinks, graph views and block references, for people building a second brain rather than a filing cabinet.

Top pick: Obsidian at 8.4 out of 10. The safest long-term home for a personal knowledge base. Budget a weekend for setup, and accept that AI here is bring-your-own. Compare it with RemNote.

01

Obsidian

Plain markdown files on your disk, with a plugin ecosystem bolted on top.

Win / Mac / iOS / Android / Linux

Best for: Long-term thinkers who want to own the files and are willing to tinker.

Obsidian alternatives

8.4A-

$4/mo

02

RemNote

Take notes and generate the flashcards in the same keystroke.

Web / Win / Mac / Linux / iOS / Android

Best for: Medical, law and language students who live in spaced repetition.

RemNote alternatives

7.9B+

$8/mo

03

Heptabase

Notes on whiteboards, for when the outline is not the shape of the idea.

Win / Mac / Linux / iOS / Android / Web

Best for: Researchers and students mapping a subject they do not understand yet.

Heptabase alternatives

7.8B+

$11.99/mo

04

Capacities

A studio for your mind, organised by object type instead of folders.

Web / Mac / Win / iOS / Android

Best for: Knowledge workers who think in people, sources and projects.

Capacities alternatives

7.7B+

$12.99/mo

05

Tana

Supertags turn loose bullets into a structured database as you type.

Web / Mac / Win / iOS / Android

Best for: Systems thinkers who want a personal database, not a notebook.

Tana alternatives

7.7B+

$10/mo

06

AFFiNE

Docs and an infinite whiteboard that are the same document.

Web / Win / Mac / Linux / iOS / Android · Open source

Best for: People who want Notion plus a whiteboard, on their own server.

AFFiNE alternatives

7.6B+

$8.90/mo

07

Amplenote

Notes and tasks that argue with each other until your day is planned.

Web / Win / Mac / Linux / iOS / Android

Best for: People who want their notes to produce a daily plan.

Amplenote alternatives

7.5B+

$7.99/mo

08

Joplin

Open source, end-to-end encrypted, and it syncs wherever you tell it to.

Win / Mac / Linux / iOS / Android / Web · Open source

Best for: Privacy-minded people leaving Evernote who want to control the storage.

Joplin alternatives

7.5B+

$3/mo

09

Octarine

Local markdown files, a clean editor and one payment.

Mac / Win / Linux / iOS

Best for: Obsidian-minded people who would rather buy a finished app than build one.

Octarine alternatives

7.5B+

$79 once

10

Supernotes

Every note is a card, and cards were built to be shared.

Web / Win / Mac / Linux / iOS / Android

Best for: Small teams and couples who share notes constantly.

Supernotes alternatives

7.5B+

$10/mo

11

Anytype

Notion-shaped, but the data is encrypted and lives on your machine.

Win / Mac / Linux / iOS / Android · Open source

Best for: People who want a Notion-style workspace without the cloud.

Anytype alternatives

7.4B

$99/yr

12

Logseq

A journal-first outliner with flashcards baked in, over local files.

Win / Mac / Linux / iOS / Android · Open source

Best for: Daily journalers and students who want linked notes plus revision.

Logseq alternatives

7.4B

Free

13

Reflect

A networked daily journal with GPT and Whisper wired in.

Web / Mac / iOS / Android

Best for: Daily journalers who talk more than they type.

Reflect alternatives

7.4B

$10/mo

14

Bear

The best-looking markdown editor on Apple platforms.

iOS / Mac

Best for: Writers on Apple hardware who want markdown without the tinkering.

Bear alternatives

7.2B

$2.99/mo

15

NotePlan

A markdown vault and your calendar, living in the same window.

Mac / iOS / Web

Best for: Mac and iPhone planners who want their notes and their day in one app.

NotePlan alternatives

7.2B

$12/mo

16

Roam Research

The app that made backlinks mainstream, now outrun by its imitators.

Web / Mac / Win / iOS / Android

Best for: People already deep in a Roam graph who do not want to migrate.

Roam Research alternatives

6.2C+

$15/mo

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